FUNPEP: Information system for "low complexity sequence regions".

Copyright (C) 1999, FUNPEP.

Multiple sequence alingment results for atrial natriuretic factor sequences from SWISSPROT.

ANF_RAT         MGSFS-ITKGFFLFLAFWLPGHIGANPVYSAVSNTDLMDFKNLLDHLEEKMPVEDEVMPP 59
ANF_MOUSE       MGSFS-ITLGFFLVLAFWLPGHIGANPVYSAVSNTDLMDFKNLLDHLEEKMPVEDEVMPP 59
ANF_RABIT       MGPFSTITVSFLFCLAFWHPDQIGANPVYNAMSNADLMDFKNLLDHLEDRMPFEDEAVPP 60
ANF_HUMAN       MSSFSTTTVSFLLLLAFQLLGQTRANPMYNAVSNADLMDFKNLLDHLEEKMPLEDEVVPP 60
ANF_CAVPO       -------------------------NPMYNVVSNADLVDFKNLLDHLEEKMPLEDEVVLP 35
ANF_HORSE       MGSFSTIMASFLLFLAFQLQGQTRANPVYGSVSNGDLMDFKNLLDRLEDKMPLEDEVMPP 60
ANF_CANFA       MG--SPIAASFLLFLAVQLLGQTGANPVYGSVSNADLLDFKNLLDRLEDKMPLEDEAESP 58
ANF_PIG         MSS-FTITVSFLLVLVFQFPGQTRANPVYGSVSNADLMDFKNLLDHLEDKMPLEDEAMPP 59
ANF_BOVIN       MGS-SAITVSFLLFLAFQLPGQTGANPVYGSVSNADLMDFKNLLDRLEDKMPLEDEAVPS 59
ANF_RANCA       MG--TSFVGYLTFVLLLLALTKVRGGPAYNSPLSSDLSDLKGLLERLEDRLPVEEVETPV 58
ANF_CHICK       MDTRGSFSCGFLLLLLIQLQ-PSRANPIYNLSPAKELASMEALLERLEDKFALIEALESN 59
                                         .* *.     :* .:: **::**:::.. :     

ANF_RAT         QALSEQTDEAGAALSSLSEVPPWTGEVNPSQRDGGALGRGPWDPSDRSALLKSKLRALLA 119
ANF_MOUSE       QALSEQTEEAGAALSSLPEVPPWTGEVNPPLRDGSASRRSPWDPSDRSALLKSKLRALLA 119
ANF_RABIT       QALSEQSDEAGAALSPLPEVPPWTGEVSPAQRDGEALGRSTWEASERSALLKSKLRALLT 120
ANF_HUMAN       QVLSEPNEEAGAALSPLPEVPPWTGEVSPAQRDGGALGRGPWDSSDRSALLKSKLRALLT 120
ANF_CAVPO       QVASEQNEEAGAVLSALPEVPSWPGEAGPAQREGGALGRGPWDSSDRSAPLKSKLRALLD 95
ANF_HORSE       QVLSDQSEEERAALSPLPEVPPWTGEVNPAQRDGGALGRGSWDSSDRSALLKSKLRALLA 120
ANF_CANFA       QALSEQNAEAGAALSPLPEVPPWTGEVSPAQRDGGALGRSPWDSSDRSALLKSKLRALLA 118
ANF_PIG         QVLSEQNEEVGAPLSPLLEVPPWTGEVNPAQRDGGALGRGPWDASDRSALLKSKLRALLA 119
ANF_BOVIN       QVLSEQNEEAGAPLSPLSEMPPWMGEVNPAQREGGVLGRGPWESSDRSALLKSKLRALLT 119
ANF_RANCA       QDIFAPNYDS-ADSS--NSAPSLTVEAARPGAD-MMYNRGSWTQQEKSSPLRNKLRELLN 114
ANF_CHICK       PDLQEPQTQ--------EEIPPELTDDSDEQKAEPKLASNTP-LSYRNPFLK-RLRG-VQ 108
                        :         . *.   :             ..   . :.. *: :**  : 

ANF_RAT         GPRSLRRSS-CFGGRIDRIGAQSGLGCNSFRYRR 152
ANF_MOUSE       GPRSLRRSS-CFGGRIDRIGAQSGLGCNSFRYRR 152
ANF_RABIT       APRSLRRSS-CFGGRIDRIGAQSGLGCNSFRYRR 153
ANF_HUMAN       APRSLRRSS-CFGGRMDRIGAQSGLGCNSFRYRR 153
ANF_CAVPO       APRSLRRSS-CFGGRMDRIGAQSSLGCNSFRYRR 128
ANF_HORSE       APRSLRRSS-CFGGRMDRIGAQSGLGCNSFRYRR 153
ANF_CANFA       APRSLRRSS-CFGGRMDRIGAQSGLGCNSFRY-- 149
ANF_PIG         APRSLRRSS-CFGGRMDRIGAQSGLGCNSFRY-- 150
ANF_BOVIN       APRSLRRSS-CFGGRMDRIGAQSGLGCNSFRYRR 152
ANF_RANCA       APRSMRRSSDCFGSRIDRIGAQSGMGCG-RRF-- 145
ANF_CHICK       MPRMMRDSG-CFGRRIDRIGSLSGMGCNGSRKN- 140
                 ** :* *. *** *:****: *.:**.  *

Gergo Kiss 13th April 1999 EMBL/Szeged