FUNPEP: Information system for "low complexity sequence regions".

Copyright (C) 1999, FUNPEP.

Multiple sequence alingment results for cystatin C sequences from SWISSPROT.

CYTC_HUMAN      MAGPLRAPLLLLAILAVALAVSPAAGSSPGKPPRLVGGPMDASVEEEGVRRALDFAVGEY 60
CYTC_MACMU      MAGPLRAPLLLLAILAVALAVSPAAGASPGKPPRLVGGPMDASVEEEGVRRALDFAVSEY 60
CYTC_SAISC      MAGPLRAPLLLLAILAVALALSPAAGASPGRTPRLLGGPMDASVEEEGVRRALDFAVSEY 60
CYTC_MOUSE      MASPLRSLLFLLAVLAVAWAATPKQG------PRMLGAPEEADANEEGVRRALDFAVSEY 54
CYTC_RAT        -------------VLAVAWAGTSRPP------PRLLGAPQEADASEEGVQRALDFAVSEY 41
                             :**** * :.         **::*.* :*...****:*******.**

CYTC_HUMAN      NKASNDMYHSRALQVVRARKQIVAGVNYFLDVELGRTTCTKTQPNLDNCPFHDQPHLKRK 120
CYTC_MACMU      NKASNDMYHSRALQVVRARKQIVAGVNYFLDVELGRTTCTKTQPNLDNCPFHEQPHLKRK 120
CYTC_SAISC      NKASNDMYHSRALQVVRARKQIVAGVNYFLDVEMGRTTCTKNQPNLDNCPFHEQPHLKRK 120
CYTC_MOUSE      NKGSNDAYHSRAIQVVRARKQLVAGVNYFLDVEMGRTTCTKSQTNLTDCPFHDQPHLMRK 114
CYTC_RAT        NKGSNDAYHSRAIQVVRARKQLVAGINYYLDVEMGRTTCTKSQTNLTNCPFHDQPHLMRK 101
                **.*** *****:********:***:**:****:*******.*.** :****:**** **

CYTC_HUMAN      AFCSFQIYAVPWQGTMTLSKSTCQDA 146
CYTC_MACMU      AFCSFQIYTVPWQGTMTLSKSTCQDA 146
CYTC_SAISC      AFCSFQIYSVPWQGIMTLSKSTCQDA 146
CYTC_MOUSE      ALCSFQIYSVPWKGTHSLTKFSCKNA 140
CYTC_RAT        ALCSFQIYSVPWKGTHTLTKSSCKNA 127
                *:******:***:*  :*:* :*::*

Gergo Kiss 2nd April 1999 EMBL/Szeged