FUNPEP: Information system for "low complexity sequence regions".

Copyright (C) 1999, FUNPEP.

The fibrinogen sequences from SWISSPROT. The multiple sequence alingment result is here.

>FIBA_HUMAN
MFSMRIVCLV LSVVGTAWTA DSGEGDFLAE GGGVRGPRVV ERHQSACKDS DWPFCSDEDW 
NYKCPSGCRM KGLIDEVNQD FTNRINKLKN SLFEYQKNNK DSHSLTTNIM EILRGDFSSA 
NNRDNTYNRV SEDLRSRIEV LKRKVIEKVQ HIQLLQKNVR AQLVDMKRLE VDIDIKIRSC 
RGSCSRALAR EVDLKDYEDQ QKQLEQVIAK DLLPSRDRQH LPLIKMKPVP DLVPGNFKSQ 
LQKVPPEWKA LTDMPQMRME LERPGGNEIT RGGSTSYGTG SETESPRNPS SAGSWNSGSS 
GPGSTGNRNP GSSGTGGTAT WKPGSSGPGS TGSWNSGSSG TGSTGNQNPG SPRPGSTGTW 
NPGSSERGSA GHWTSESSVS GSTGQWHSES GSFRPDSPGS GNARPNNPDW GTFEEVSGNV 
SPGTRREYHT EKLVTSKGDK ELRTGKEKVT SGSTTTTRRS CSKTVTKTVI GPDGHKEVTK 
EVVTSEDGSD CPEAMDLGTL SGIGTLDGFR HRHPDEAAFF DTASTGKTFP GFFSPMLGEF 
VSETESRGSE SGIFTNTKES SSHHPGIAEF PSRGKSSSYS KQFTSSTSYN RGDSTFESKS 
YKMADEAGSE ADHEGTHSTK RGHAKSRPVR DCDDVLQTHP SGTQSGIFNI KLPGSSKIFS 
VYCDQETSLG GWLLIQQRMD GSLNFNRTWQ DYKRGFGSLN DEGEGEFWLG NDYLHLLTQR 
GSVLRVELED WAGNEAYAEY HFRVGSEAEG YALQVSSYEG TAGDALIEGS VEEGAEYTSH 
NNMQFSTFDR DADQWEENCA EVYGGGWWYN NCQAANLNGI YYPGGSYDPR NNSPYEIENG 
VVWVSFRGAD YSLRAVRMKI RPLVTQ

>FIBA_CHICK
MIPVTILCVL LCLNLAWAQD GKTTFEKEGG GGRGPRILEN MHESSCKYEK NWPICVDDDW 
GTKCPSCCRM QGIIDDTDQN YSQRIDNIRQ QLADSQNKYK TSNRVIVETI NILKPGLEGA 
QQLDENYGHV STELRRRIVT LKQRVATQVN RIKALQNSIQ EQVVEMKRLE VDIDIKIRAC 
KGSCARSFDY QVDKEGYDNI QKHLTQASSI DMHPDFQTTT LSTLKMRPLK DSNVPEHFKL 
KPSPEMQAMS AFNNIKQMQV VLERPETDHV AEARGDSSPS HTGKLITSSH RRESPSLVDK 
TSSASSVHRC TRTVTKKVIS GPDGPREEIV EKMVSSDGSD CSHLQGGREG STYHFSGTGD 
FHKLDRLLPD LESFFTHDSV STSSRHSIGS STSSHVTGAG SSHLGTGGKD KFTDLGEEEE 
DDFGGLQPSG FAAGSASHSK TVLTSSSSSF NKGGSTFETK SLKTRETSEQ LGGVQHDQSA 
EDTPDFKARS FRPAAMSTRR SYNGKDCDDI RQKHTSGAKS GIFKIKPEGS NKVLSVYCDQ 
ETTLGGWLLI QQRMDGSVNF NRTWQDYRRG FGSVDGKGQG ELWLGNENIH LLTQNDTLLR 
VELEDWDGNA AYAEYIVQVG TEAEGYALTV SSYEGTAGDA LVAGWLEEGS EYTSHAQMQF 
STFDRDQDHW EESCAEVYGG GWWYNSCQAA NLNGIYYPGG HYDPRYNVPY EIENGVVWIP 
FRASDYSLKV VRMKIRPLET L

>FIBA_RAT
MLSLRVACLI LSLASTVWTA DTGTTSEFIE AGGDIRGPRI VERQPSQCKE TDWPFCSDED 
WNHKCPSGCR MKGLIDEANQ DFTNRINKLK NSLFDFQKNN KDSNSLTRNI MEYLRGDFAN 
ANNFDNTFGQ VSEDLRRRIQ ILKRKVIEKA QQIQVLQKDV RDQLIDMKRL EVDIDIKIRS 
CKGSCSRSVS REINLKDYEG QQKQLEQVIA KDLLPAKDRQ YLPAIKMSPV PDLVPGSFKS 
QLQEGPPEWK ALTEMRQMRM ELERPGKDGA SRGDLPGDSR GDSATRGPGS KIENPMTPGH 
GGSGYWRPGS SGSGSDGNWG SGTTGSDDTG TWGAGSSRPS SGSGNLKPSN PDWGEFSEFG 
GSSSPATRKE YHTGKLVTSK GDKELLIGNE KVTSTGTSTT RRSCSKTITK TVLGNDGHRE 
VVKEVVTSDD GSDCGDGMDL GLTHSFSGRL DELSRMHPEL GSFYDSRFGS LTSNFKEFGS 
KTSDSDIFTD IENPSSHVPE FSSSSKTSTV RKQVTKSYKM ADEAASEAHQ EGDTRTTKRG 
RARTMRDCDD VLQTHPSGAQ NGIFSIKLPG SSKIFSVYCD QETSLGGWLL IQQRMDGSLN 
FNRTWQDYKR GFGSLNDKGE GEFWLGNDYL HLLTLRGSVL RVELEDWAGK EAYAEYHFRV 
GSEAEGYALQ VSSYQGTAGD ALMEGSVEEG TEYTSHSNMQ FSTFDRDADQ WEENCAEVYG 
GGWWYNSCQA ANLNGIYYPG GTYDPRNNSP YEIENGVLWV PFRGADYSLW AVRMKIRPLV 
GQ 

>FIB2_PETMA
MTLRGVSMVL TWCLLVSKAW SSGDDSSIDI RGPRLVMPSQ ARDSCSTQQT TELCVEGNWG 
RKCPGGCRML SMLSRTEKDS MRRVDELTKR LARMIQLHTE IHSYYRSVSD VSNQVVTDRE 
DTEARFYALL SDLERKIIYL QRRINGQLTL LSQLRNGIAQ QTSTILQLEV DTDVALRTCK 
GACARQVRYR VDKEMNLQLE KANAYLSGIN LALFEEIVHE SFSVERDDAR SLHPYSGGPA 
SDSEPRDGDG TASQATGFRS DATDPGVSHG NSSKSFGNVD ERSKVEKDVN VASTSSVSSS 
SSSSSSSSST SSTISSTQKT EELSFKKVSV STAAVAGKDT DDFQWDSVQT ASQTEEGFVR 
DTGADSTWNQ HNVQWNSDFG TASDDEPDFQ ARSHRTNLSE YIDCLDVLQR RPGGKASGLY 
EVRPRGAKRA LTVHCEQDTD GGGWTLVQQR EDGSLNFNRS FSAYREGFGT VDGSGHGELW 
LGLEAMYLLA HEDSTMRVEL QGWDGAGAHA EYTVTLRDDS KGYALQVSDY RGTAGNALVS 
GVADDPELTS HGGMTFSTYD RDTDKWSDGS CAEWYGGGWW INACQAANLN GVYYQGGPYD 
PREKPPYEVE NGVVWATYRG SDYSLKRTAV RFRRVQIPIV E

>FIBG_XENLA
MTRLPKQGLL LLQSLALLSS AFGNIIPNTD NCCILDGRFG EYCPTTCGIS DFLNRYQENV 
DTDLQYLENL LTQISNSTSG TTIIVEHLID SGKKPATSPQ TAIDPMTQKS KTCWMKLTDM 
KNYYQYEENI LYLQEVYSSN QNKIFLLKQK IANLELQCQQ PCRDTVQIQE FTGKDCQEVA 
NKGARLSGLY YIKPLKAKQQ FLVYCEIEPS GSAWTVIQRR LDGSVNFHKN WVQYREGFGY 
LSPNDKTEFW LGNEKIHLLS TQSTIPYVMR IELEDWSNQK STADYSTFRL GSEKDNYRFT 
YAYFIGGDAG DAFDGFDFGD DPSDKFYTSH NGMQFSTFDK DNDKFDGNCA EQDGSGWWMN 
RCHAAHLNGK YYQGGTYSEA DSGPSGYDNG IIWATWRRRW YSMKSVTMKI MPLNRYGAEG 
QQTLGGSKKS DFENRGDF

>FIBG_BOVIN
MSWSSHPPSV IFYILSLLSS ACLAYVATRD NCCILDERFG SYCPTTCGIA DFLNNYQTSV 
DKDLRTLEGI LYQVENKTSE ARELVKAIQI SYNPDQPSKP NNIESATKNS KSMMEEIMKY 
ETLISTHEST IRFLQEVYNS NSQKIVNLRD KVVQLEANCQ EPCQDTVKIH DVTGRDCQDV 
ANKGAKESGL YFIRPLKAKQ FLVYCEIDGS GNGWTVFQKR LDGSLDFKKN WIQYKEGFGH 
LSPTGTGNTE FWLGNEKIHL ISTQSSIPYV LRIQLEDWNG RTSTADYASF KVTGENDKYR 
LTYAYFIGGD AGDAFDGYDF GDDSSDKFFT SHNGMQFSTW DSDNDKYDGN CAEQVGIGWW 
MNKCHAGHLN GVYYQGGTYS KTSTPNGYDN GIIWATWKSR WYSMKKTTMK IIPLNRLAIG 
EGQQHQLGGA KQVGVEHHVE IEYD

>FIBG_HUMAN
MSWSLHPRNL ILYFYALLFL SSTCVAYVAT RDNCCILDER FGSYCPTTCG IADFLSTYQT 
KVDKDLQSLE DILHQVENKT SEVKQLIKAI QLTYNPDESS KPNMIDAATL KSRIMLEEIM 
KYEASILTHD SSIRYLQEIY NSNNQKIVNL KEKVAQLEAQ CQEPCKDTVQ IHDITGKDCQ 
DIANKGAKQS GLYFIKPLKA NQQFLVYCEI DGSGNGWTVF QKRLDGSVDF KKNWIQYKEG 
FGHLSPTGTT EFWLGNEKIH LISTQSAIPY ALRVELEDWN GRTSTADYAM FKVGPEADKY 
RLTYAYFAGG DAGDAFDGFD FGDDPSDKFF TSHNGMQFST WDNDNDKFEG NCAEQDGSGW 
WMNKCHAGHL NGVYYQGGTY SKASTPNGYD NGIIWATWKT RWYSMKKTTM KIIPFNRLTI 
GEGQQHHLGG AKQAGDV

>FIBH_HUMAN
MSWSLHPRNL ILYFYALLFL SSTCVAYVAT RDNCCILDER FGSYCPTTCG IADFLSTYQT 
KVDKDLQSLE DILHQVENKT SEVKQLIKAI QLTYNPDESS KPNMIDAATL KSRIMLEEIM 
KYEASILTHD SSIRYLQEIY NSNNQKIVNL KEKVAQLEAQ CQEPCKDTVQ IHDITGKDCQ 
DIANKGAKQS GLYFIKPLKA NQQFLVYCEI DGSGNGWTVF QKRLDGSVDF KKNWIQYKEG 
FGHLSPTGTT EFWLGNEKIH LISTQSAIPY ALRVELEDWN GRTSTADYAM FKVGPEADKY 
RLTYAYFAGG DAGDAFDGFD FGDDPSDKFF TSHNGMQFST WDNDNDKFEG NCAEQDGSGW 
WMNKCHAGHL NGVYYQGGTY SKASTPNGYD NGIIWATWKT RWYSMKKTTM KIIPFNRLTI 
GEGQQHHLGG AKQVRPEHPA ETEYDSLYPE DDL

>FIBA_BOVIN
EDGSDPPSGD FLTEGGGVRG PRLVERQQSA CKETGWPFCS DEDWNTKCPS GCRMMVLETF 
GGDGHARGDS VSQGTGLAPG GSVSSGTKQE FHTGKLVTTK GDKELLIDNE KVTSGHTTTT 
RRSCSSITKT VTNADGRTET TKEVVKSEDG SDCGDADFDW HHTFPSRGNL DDFFHRDKDD 
FFTRSSHEFD GRTGLAPEFA ALGESGSSSS KTSTHSKQFV SSSTTVNRGG SAIESKHFKM 
EDEAESLEDL GFKGAHGTQK GHTKARPARG IHTSPLGEPT LTP

>FIBG_RAT
MNWSLQLRSF ILCWALLLLS PTGLAQYTAT RDNCCILDER FGSYCPTTCG ISDFLNSYQT 
DVDTDLQTLE NILQRAENRT TEAKELIKAI QVYYNPDQPP KPGMIEGATQ KSKKMVEEIL 
KYEALLLTHE SSIRYLQDIY TSNKQKITNL KQKVAQLEAL CQEPCKDSVR IYDITGKDCQ 
DTANKGAKES GLYSIRPLKA TEQFLVYCET DGPGNGWTEF KKRLDGSVDF LKNWIQYKEG 
FGHLSPTGTT EFWLGNEKNH LISMQSTIPY ALRIQLKDWS GRTSTADYAM FRVGPESDKY 
RLTYAYFIGG DAGDAFDGYD FGDDPSDKFF TSHNGMHFST WDNDNDKFEG NCAEQDGSGW 
WMNKCHAGHL NGVYYQGGTY SKSSTPNGYD NGIIWATWKT RWYSMKETTM KIIPFNRLSI 
GDGQQHHMGG SKQVSVEHEV DVEYP

>FIBG_PETMA
MGRIGTPVFL AFLSALTCSL QVHAQVRDLK QCSNDPEFGR YCPTTCGVAD VLSKYAKGVD 
EDSSFIDSVL TQLAAKHGIV EGNVNIVNED VRITRDEAQI IKDSGQKTVQ KILEEVRILE 
QIGVSHDAQI QELSEMWRVN QQFVTRLQQQ LVDIRQTCSR SCQDTTANKI SPITGKDCQQ 
VVDNGGKDSG LYYIKPLKAK QPFLVFCEIE NGNGWTVIQH RHDGSVNFTR DWVSYREGFG 
YLAPTLTTEF WLGNEKIHLL TGQQAYRLRI DLTDWENTHR YADYGHFKLT PESDEYRLFY 
SMYLDGDAGN AFDGFDFGDD PQDKFYTTHL GMLFSTPERD NDKYEGSCAE QDGSGWWMNR 
CHAGHLNGKY YFGGNYRKTD VEFPYDDGII WATWHDRWYS LKMTTMKLLP MGRDLSGHGG 
QQQSKGNSRG DN

>FIBB_BOVIN
QFPTDYDEGQ DDRPKVGLGA RGHRPYDKKK EEAPSLRPVP PPISGGGYRA RPATATVGQK 
KVERKPPDAD GCLHADPDLG VLCPTGCKLQ DTLVRQERPI RKSIEDLRNT VDSVSRTSSS 
TFQYITLLKN MWKGRQNQVQ DNENVVNEYS SHLEKHQLYI DETVKNNIPT KLRVLRSILE 
NLRSKIQKLE SDVSTQMEYC RTPCTVTCNI PVVSGKECEK IIRNEGETSE MYLIQPEDSS 
KPYRVYCDMK TEKGGWTVIQ NRQDGSVDFG RKWDPYKQGF GNIATNAEGK KYCGVPGEYW 
LGNDRISQLT NMGPTKLLIE MEDWKGDKVT ALYEGFTVQN EANKYQLSVS KYKGTAGNAL 
IEGASQLVGE NRTMTIHNSM FFSTYDRDND GWKTTDPRKQ CSKEDGGGWW YNRCHAANPN 
GRYYWGGAYT WDMAKHGTDD GVVWMNWQGS WYSMKKMSMK IRPYFPEQ

>FIBB_PETMA
EDLSLVGQPE NDYDTGDDBT AADPDSNNTA AALDVRRPLP SGTRVRRPPL RHRRLAPGAV 
MSRDPPASPR PQEAQKAIRD EGGCMLPESD LGVLCPTGCE LREELLKQRD PVRYKISMLK 
QNLTYFINSF DRMASDSNTL KQNVQTLRRR LNSRSSTHVN AQKEIENRYK EVKIRIESTV 
AGSLRSMKSV LEHLRAKMQR MEEAIKTQKE LCSAPCTVNC RVPVVSGMHC EDIYRNGGRT 
SEAYYIQPDL FSEPYKVFCD MESHGGGWTV VQNRVDGSSN FARDWNTYKA EFGNIAFGNG 
KSICNIPGEY WLGTKTVHQL TKQHTQQVLF DMSDWEGSSV YAQYASFRPE NEAQGYRLWV 
EDYSGNAGNA LLEGATQLMG DNRTMTIHNG MQFSTFDRDN DNWNPGDPTK HCSREDAGGW 
WYNRCHAANP NGRYYWGGIY TKEQADYGTD DGVVWMNWKG SWYSMRQMAM KLRPKWP

>FIBA_PARPA
MFSFIMKAAI LLILVGCISF CISSEPLNES EITFEREERS LADPAGRQKR QSGLSCPKRI 
SHSPEYPRDC YDILQSCSGQ SPPSGQYYIQ PDGGNLIKVY CDMETDEGGW TVFQRRIDGT 
INFYRSWSYY QTGFGNLNTE FWLGNDNIHY LTSQGDYELR VELNNTLGNH YYAKYNKFRI 
GDSFSEYLLV LGAYSGTAGD SLAYHNTMRF STYDNDNDVY SINCASHSSY GRGAWWYKSC 
LLSNLNGQYY DYSGAPSIYW SYLPGDNDQI PFAEMKLRNR SI

>FIBB_HUMAN
MKRMVSWSFH KLKTMKHLLL LLLCVFLVKS QGVNDNEEGF FSARGHRPLD KKREEAPSLR 
PAPPPISGGG YRARPAKAAA TQKKVERKAP DAGGCLHADP DLGVLCPTGC QLQEALLQQE 
RPIRNSVDEL NNNVEAVSQT SSSSFQYMYL LKDLWQKRQK QVKDNENVVN EYSSELEKHQ 
LYIDETVNSN IPTNLRVLRS ILENLRSKIQ KLESDVSAQM EYCRTPCTVS CNIPVVSGKE 
CEEIIRKGGE TSEMYLIQPD SSVKPYRVYC DMNTENGGWT VIQNRQDGSV DFGRKWDPYK 
QGFGNVATNT DGKNYCGLPG EYWLGNDKIS QLTRMGPTEL LIEMEDWKGD KVKAHYGGFT 
VQNEANKYQI SVNKYRGTAG NALMDGASQL MGENRTMTIH NGMFFSTYDR DNDGWLTSDP 
RKQCSKEDGG GWWYNRCHAA NPNGRYYWGG QYTWDMAKHG TDDGVVWMNW KGSWYSMRKM 
SMKIRPFFPQ Q

>FIBB_RAT
MRHLWLLLLS VSLVQTQAAT TDSDKVDLSI ARGHRPVDRR KEEPPSLRPA PPPISGGGYR 
ARPAKVDAGQ KKVERKPPDA GGCVHGDGDM GVLCATGCEL RQTLLNHERP IKNSIAELNS 
NINSVYETSS VTFQYLTLLK DMWKKKQAQV KDNENVINEY SSILEDQKLY IDETVNDNIP 
LNLRVLRSIL EDLRSKMQKL ESDISAQTEY CHTPCTVNCN IPVVSGKECE EIIRKGGETS 
EMYLIQPDTS SKPYRVYCDM KTENGGWTVI QNRQDGSVDF GRKWDPYKKG FGNIATNEDT 
KKYCGLPGEY WLGNDKISQL TRIGPTELLI EMEDWKGDKV KAHYGGFTVQ TEANKYQVSV 
NKYKGTAGNA LMEGASQLVG ENRTMTIHNG MFFSTYDRDN DGWVTTDPRK QCSKEDGGGW 
WYNRCHAANP NGRYYWGGLY SWDMSKHGTD DGVVWMNWKG SWYSMRRMSM KIRPVFPQQ

>FIBB_CHICK
ASVEYDNEED SPQIDARAHR PLDKRQEAAP TLRPVAPPIS GTGYQPRPPK QDKQAMKKGP 
IIYPDAGGCK HPLDELGVLC PTGCELQTTL LKQEKTVKPV LRDLKDRVAK FSDTSTTMYQ 
YVNMIDNKLV KTQKQRKDND IILSEYNTEM ELHYNYIKDN LDNNIPSSLR VLRAVIDSLH 
KKIQKLENAI ATQTDYCRSP CVASCNIPVV SGRECEDIYR KGGETSEMYI IQPDPFTTPY 
RVYCDMETDN GGWTLIQNRQ DGSVNFGRAW DEYKRGFGNI AKSGGKKYCD TPGEYWLGND 
KISQLTKIGP TKVLIEMEDW NGDKVSALYG GFTIHNEGNK YQLSVSNYKG NAGNALMEGA 
SQLYGENRTM TIHNGMYFST YDRDNDGWLT TDPRKQCSKE DGGGWWYNRC HAANPNGRYY 
WGGTYSWDMA KHGTDDGIVW MNWKGSWYSM KKMSMKIKPY FPD


Gergo Kiss 17th April 1999 EMBL/Szeged