FUNPEP: Information system for "low complexity sequence regions".

Copyright (C) 1999, FUNPEP.

Multiple sequence alingment results for gelsolin sequences from SWISSPROT.

GELS_PIG        ----------LGALVVALCALSPPARAATASRGAPQARAPQGRVSPMRPSTMVVEHPEFL 50
GELS_HORSE      ----------------------------------------------------VVEHPEFL 8
GELS_HUMAN      MAPHRPAPALLCALSLALCALSLPVRAATASRGASQAGAPQGRVPEARPNSMVVEHPEFL 60
GELS_MOUSE      ----------------------------------------------------VVEHPEFL 8
GELS_XENLA      ------------------------------------------------------------
                                                                            

GELS_PIG        KAGKEPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNEC 110
GELS_HORSE      KAGKEPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGILQYDLHYWLGNEC 68
GELS_HUMAN      KAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNEC 120
GELS_MOUSE      KAGKEPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNEC 68
GELS_XENLA      ------------------------------------------------------------
                                                                            

GELS_PIG        SQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVV 170
GELS_HORSE      SQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVV 128
GELS_HUMAN      SQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGFKHVV 180
GELS_MOUSE      SQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESSTFSGYFKSGLKYKKGGVASGFKHVV 128
GELS_XENLA      ------------------------------------------------------------
                                                                            

GELS_PIG        PNEVAVQRLFQVKGRRVVRATEVPVSWESFNRGDCFILDLGNDIYQWCGSNSNRYERLKA 230
GELS_HORSE      PNEVVVQRLLQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIYQWCGSKSNRFERLKA 188
GELS_HUMAN      PNEVVVQRLFQVKGRRVVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYERLKA 240
GELS_MOUSE      PNEVVVQRLFQVKGRRVVRATEVPVSWDSFNNGDCFILDLGNNIYQWCGSGSNKFERLKA 188
GELS_XENLA      ------------------------------------------------------------
                                                                            

GELS_PIG        TQVSKGIRDNERSGRAHVHVSEEDAEPAGMLQVLGPKPTLPEGTEDTVKEDAANRKLAKL 290
GELS_HORSE      TQVSKGIRDNERSGRAQVSVFEEGAEPEAMLQVLGPKPTLPEATEDTVKEDAANRKLAKL 248
GELS_HUMAN      TQVSKGIRDNERSGRARVHVSEEGTEPEAMLQVLGPKPALPAGTEDTAKEDAANRKLAKL 300
GELS_MOUSE      TQVSKGIRDNERSGRAQVHVSEEETEPEAMLQVLGPKPALPEGTEDTAKEDAANRKLAKL 248
GELS_XENLA      ------------------------------------------------------------
                                                                            

GELS_PIG        YKVSNGAGTMTVSLVADENPFAQGALKSEDCFILDHGKDGKIFVWKGKQANTEERKAALK 350
GELS_HORSE      YKVSNGAGPMVVSLVADENPFAQGALRSEDCFILDHGKDGKIFVWKGKQANMEERKAALK 308
GELS_HUMAN      YKVSNGAGTMSVSLVADENPFAQGALKSEDCFILDHGKDGKIFVWKGKQANTEERKAALK 360
GELS_MOUSE      YKVSNGAGSMSVSLVADENPFAQGPLRSEDCFILDHGRDGKIFVWKGKQANMEERKAALK 308
GELS_XENLA      ------------------------------------------------------------
                                                                            

GELS_PIG        TASDFISKMNYPKQTQVSVLPEGGETPLFKQFFKNWRDPDQVDGPGLSYLSSHIANVERV 410
GELS_HORSE      TASDFISKMDYPKQTQVSVLPEGGETPLFRQFFKNWRDPDQTEGLGLAYLSSHIAHVERV 368
GELS_HUMAN      TASDFITKMDYPKQTQVSVLPEGGETPLFKQFFKNWRDPDQTDGLGLSYLSSHIANVERV 420
GELS_MOUSE      TASDFISKMQYPRQTQVSVLPEGGETPLFKQFFKNWRDPDQTDGPGLGYLSSHIANVERV 368
GELS_XENLA      ----FISKMGYPKQTQVQVLPESGETPLFKQFFKNWRDKEATDGMGVAYVPNHIAKIENV 56
                    **:** **:****.****.******:******** : .:* *:.*:..***::*.*

GELS_PIG        PFDAATLHTSTAMAAQHGMDDDGTGQKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNY 470
GELS_HORSE      PFDAATLHTSTAMAAQHGMDDDGTGQKQIWRVEGSNKVPVDPATYGQFYGGDSYIILYNY 428
GELS_HUMAN      PFDAATLHTSTAMAAQHGMDDDGTGQKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNY 480
GELS_MOUSE      PFDAGTLHTSTAMAAQHGMDDDGTGQKQIWRIEGSNKVPVDPATYGQFYGGDSYIILYNY 428
GELS_XENLA      PFDVTVLHESPAMAAQHGMVDDGSGKKQIWRIENCEKVPVLESHYGQFYGGDSYIILYHY 116
                ***. .** *.******** ***:*:*****:*..:****  : **************:*

GELS_PIG        RHGGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFG 530
GELS_HORSE      RHGSRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFG 488
GELS_HUMAN      RHGGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFG 540
GELS_MOUSE      RHGGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFG 488
GELS_XENLA      KSGGKQGQIIYTWQGDDSTKDEITASAILSAQLDEELGGGPVQVRVVQGKEPAHLISLFG 176
                : *.:******.*** :**:**::*****:********* *** ***********:****

GELS_PIG        GKPMIIYRGGTSREGGQTAPASTRLFQVRASSSGATRAVEVIPKAGALNSNDAFVLKTPS 590
GELS_HORSE      GKPMIVYKGGTSREGGQTAPASTRLFQVRASSSGATRAVEIIPKAGALNSNDAFVLKTPS 548
GELS_HUMAN      GKPMIIYKGGTSREGGQTAPASTRLFQVRANSAGATRAVEVLPKAGALNSNDAFVLKTPS 600
GELS_MOUSE      GKPMIIYKGGTSRDGGQTAPASIRLFQVRASSSGATRAVEVMPKSGALNSNDAFVLKTPS 548
GELS_XENLA      GKPMIIYKGGTSREGGQTKDANVRLFQVRTSSSGFSRAVEVDNTASNLNSNDAFVLTTPS 236
                *****:*:*****:****  *. ******:.*:* :****:  .:. *********.***

GELS_PIG        AAYLWVGTGASEAEKTGAQELLRVLRAQPVQVAEGSEPDSFWEALGGKAAYRTSPRLKDK 650
GELS_HORSE      AAYLWVGAGASEAEKTGAQELLRVLRAQPVQVAEGSEPDSFWEALGGKATYRTSPRLKDK 608
GELS_HUMAN      AAYLWVGTGASEAEKTGAQELLRVLRAQPVQVAEGSEPDGFWEALGGKAAYRTSPRLKDK 660
GELS_MOUSE      AAYLWVGAGASEAEKTAAQELLKVLRSQHVQVEEGSEPDGFWEALGGKTSYRTSPRLKDK 608
GELS_XENLA      ASYLWVGQGSTNVEKNGAKELLKILGVSASEIPEGQETDDFWGALGGKADYRTSARLKDK 296
                *:***** *:::.**..*:***::*  .  :: **.*.*.** *****: ****.*****

GELS_PIG        KMDAHPPRLFACSNKIGRFVVEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEK 710
GELS_HORSE      KMDAHPPRLFACSNKIGRFVIEEVPGEFMQEDLATDDVMLLDTWDQVFVWVGKDSQDEEK 668
GELS_HUMAN      KMDAHPPRLFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEK 720
GELS_MOUSE      KMDAHPPRLFACSNRIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEK 668
GELS_XENLA      -LNAHPPRLFACSNKTGRFIIEEVPGEISQDDLATDDVMLLDTWDQVYVWVGNEAQEDEK 355
                 ::***********: ***::******: *:****************:****:::*::**

GELS_PIG        TEALTSAKRYIETDPANRDRRTPINVVKQGFEPPSFVGWFLGWDDNYWSVDPLDRAIAEL 770
GELS_HORSE      TEALTSAKRYIDTDPAHRDRRTPITVVKQGFEPPSFVGWFLGWDDSYWSVDPLDRALAEL 728
GELS_HUMAN      TEALTSAKRYIETDPANRDRRTPITVVKQGFEPPSFVGWFLGWDDDYWSVDPLDRAMAEL 780
GELS_MOUSE      TEALTSAKRYIETDPANRDRRTPITVVRQGFEPPSFVGWFLGWDNNYWSVDPLDRALAEL 728
GELS_XENLA      KEAIASAYKYIESDPANRDKRTPVAITKQGFEPPTFIGWFLGWEADYWDVDPLERAMAGL 415
                .**::** :**::***:**:***: :.:******:*:******: .**.****:**:* *

GELS_PIG        AA 772
GELS_HORSE      AA 730
GELS_HUMAN      AA 782
GELS_MOUSE      AA 730
GELS_XENLA      SS 417
                ::

Gergo Kiss 2nd April 1999 EMBL/Szeged