Compute Facilities

Welcome to the BIOcomputing 3D modelling unit compute facility page. This page holds pointers to useful compute facilities. This is a kind of hotlist to compute servers that are useful in our dayly work. These are not servers that we made, but servers that we use.

SRS: Database searching
BLAST: Bork group BLAST2 server
Find structural homologs (Bork group server).
PHD server.
GeneQuiz (help).
NIH Entrez at NIH.

And if you cannot find something, here are some of the better hotlists:

Deambulum
ABIM
BioNetbook
Ferring
McGill
Pedro's list was the first ever good hotlist in this field, but is unfortunately no longer properly maintained. Any way, here it is:
Pedro's BioMolecular Research Tools - Molecular Biology Search and Analysis (USA)
Pedro's BioMolecular Research Tools - Bibliographic, Text and WWW Searches (USA)
Pedro's BioMolecular Research Tools - Guides, Tutorials and Help Tools (USA)

If you have WHAT IF installed on your machine, and you have the mime types set properly for running the EMBL BIOcomputing modeling course you can run a couple WHAT IF options without understanding anything about this program. This special page holds a few options only, but more can be created upon request.