The EMBL Sander/Vriend Groups
Welcome to the joint Sander / Vriend World Wide Web pages. This is an index of
things that people in these groups have produced, and contains pointers
to information outside the group that we find interesting.
Our groups
Software designed by group members
- WHAT IF: Macromolecular modelling program and its free subsets.
- K2D: Protein secondary structure prediction from CD spectra.
- DSSP: Definition of Secondary Structure of Proteins.
Searching databases and predicting/verifying structures
- PredictProtein: Multiple alignments; predictions of secondary structure, accessibility, and helical transmembrane regions; detection of remote homologues (threading); and evaluation of prediction accuracy.
- K2D: Protein secondary structure prediction from CD spectra.
- PROPSEARCH: Compositional search of sequence databases using a sequence or experimental amino acid analysis data.
- MAXSPROUT: (Re)constructing full coordinates from C-alpha atoms.
- DALI: Comparison of protein structures in 3D
- The 'biotech' Protein Structure Verification server.
- Homology modelling and protein structure analysis servers.
Databases designed by group members
- DSSP: Definition of Secondary Structure of Proteins
- FSSP: Families of Structurally Similar Proteins
- HSSP: Homology-derived Secondary Structure of Proteins
- PDBSELECT: Unique subset of 3-D protein structures
- PDBFINDER: Your entry into the PDB database
- PDBREPORT: Structure verification reports for PDB structures
Information services
- Genequiz: automated analysis of genomes
- GPCRDB: G protein-coupled receptor (GPCR) data
- PRODRG: Small molecule interpretation server
- Modules in extracellular proteins
Miscellaneous information
[wusage and analog access statistics for the Sander/Vriend group server]
© G.V., J.W. 2nd November 1999